Protein ZmGATA6
ZmGATA6 is a protein in the C2C2-GATA family.
Information
TF Name: ZmGATA6
Species: Maize
TF Family: C2C2-GATA
Gene Name(Synonym): GATA6
Uniprot ID: K7TMG0
Subgenome: 2

Protein ZmGATA6

ZmGATA6 is a protein in the C2C2-GATA family.

Overview of domains present in v5 transcripts
PF00320
Zm00001eb427580_T001
Zm00001eb427580_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d025953DAPseq no logo sequence fimo position
Zm00001d025953DAPseq no logo sequence fimo position
Zm00001d025953ChIPseq no logo sequence fimo position
Zm00001d025953PChIPseq no logo sequence fimo position

Interactions where ZmGATA6 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGATA6 is the target  
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There are 201 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb427580_T001 from maize genome v5

Amino Acid Sequence
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MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00320
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Nucleotide Sequence
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GGGGGGGCGAACGCGCCAAAGTGGC...

GRMZM2G054615_T01 from maize genome v3


Related TFome: pUT5896

Amino Acid Sequence
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MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

Nucleotide Sequence
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CGGCGCGCGACGAAGGGTGTGAATA...

GRMZM2G054615_T02 from maize genome v3

Amino Acid Sequence
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MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSIHSNSHRKVLEMRRKKEGGMVA
TAAPAVASF

Nucleotide Sequence
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CGGCGCGCGACGAAGGGTGTGAATA...

Zm00001d025953_T001 from maize genome v4

Amino Acid Sequence
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MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLDDGRMDALKCNNSVLPEETTADA
AGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVE
ELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPV
KAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKH
GGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPAC
SPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

Nucleotide Sequence
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GGGGGGGCGAACGCGCCAAAGTGGC...

Zm00001d025953_T002 from maize genome v4

Amino Acid Sequence
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MRAVNGGDDTGEGEAQRPALQPLWRAEDPAVACGPRGRQDAVQRVRRPLQVGPAPPRVPPGVQPHVREQHPLQLPPQGPR
DAPQEGGRHGCHRRAGRGVVLSLCPPCQRRSRKEGGMEAGHAAVAVHFFSPDVIALYRT

Nucleotide Sequence
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GGCGAGGAACGGCGCGCGACGAAGG...

Zm00001d025953_T003 from maize genome v4

Amino Acid Sequence
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MLHQTTLIPPSVSAASSSPFLHAATTAPAPGGGSCTPAFLRGASAMPSYAHHRSSPLVKDDGRMDALKCNNSVLPEETTA
DAAGAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHD
VEELEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMI
PVKAKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKS
KHGGKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRP
ACSPTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

Nucleotide Sequence
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ATCCAATGCTCCACCAAACAACGCT...

Zm00001d025953_T004 from maize genome v4

Amino Acid Sequence
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VPPSRLVPVRRRAGARRGPFQLRPPPAAAAVEEVQARWQGQQAQAQEARAEAEAPPPSPPVRGRVAARAQRPALQPLWRA
EDPAVACGPRGRQDAVQRVRRPLQVGPAPPRVPPGVQPHVREQHPLQLPPQGPRDAPQEGGRHGCHRRAGRGVVLSLCPP
CQRRRLATQRWLYIFFPRT

Nucleotide Sequence
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GTTCCTCCGTCTAGACTCGTCCCCG...

Zm00001eb427580_T002 from maize genome v5

Amino Acid Sequence
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MVLFGFLYFFFFLRDKHTHTQSRDGRTALVAFCFWYWGFVILTHGVYACFSGRPVKDDGRMDALKCNNSVLPEETTADAA
GAFVEKDGFSVEDLLDLEEFAEPDKDVAEREDDDAPPAAAAAAERSKADSQPSSVVKYDLPPLLPPPPEMVDLPSHDVEE
LEWVSRIMDDSLSELQPQAQPKPAAAVVASSAARPPLAQQRRPFAHDGTYRAVAAAPPQAGPQRTPTICALSTEAMIPVK
AKRSKRSRGPGWSRPGASFLPDSASSSSTTTTSSCSSSGSISPFLRLDSSPFGGGLELGEGLFSYGHLLPRPPSKKSKHG
GKGSKHRPKKRGRKPKHLPPPHPSAAASQPGPSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACS
PTFVSSIHSNSHRKVLEMRRKKEGGMVATAAPAVASF

Nucleotide Sequence
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GAAACGGCACGGCGCGTCACTTGTT...


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